PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04990.1.g00010.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 1102aa    MW: 118252 Da    PI: 8.266
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04990.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.6e-174796255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  Zpz_sc04990.1.g00010.1.am.mk 47 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 96
                                  799******.7*********32...35**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.68E-1847104IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.4E-2747104IPR001471AP2/ERF domain
PfamPF008473.8E-124796IPR001471AP2/ERF domain
CDDcd000185.00E-2847103No hitNo description
PROSITE profilePS5103219.83647104IPR001471AP2/ERF domain
SMARTSM003801.2E-3347110IPR001471AP2/ERF domain
PRINTSPR003671.1E-64859IPR001471AP2/ERF domain
PRINTSPR003671.1E-67086IPR001471AP2/ERF domain
PfamPF059104.3E-888321099IPR008586Protein of unknown function DUF868, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1102 aa     Download sequence    Send to blast
MELQFQKPQS HAQQQQCQYQ AVSVVAKETA GKLSRARSKC GGGGGGKFVG VRQRPSGRWV  60
AEIKDTTQKI RMWLGTFETA EEAARAYDEA ACLLRGANTR TNFAAAGGAG SAPPVSPLAS  120
RIRALLHHKK LKKTVARQPD VAFSPPAAAA YRHGGGTGSV AATSTSASTV TTTTSSVSPS  180
SSPSSTTIKF AMTSGGIRTP ILPVPSHHTF TEESACYRPY LLTTGSDEFQ HQYEQSWTLN  240
TSSLPPTDGR DNACSRMPEL EKISPEKDGP ASPPHGEDRV QGGQDFFDAG NDASDSLVRT  300
FWVRFDLLDC SCRGANSVQK CMRKGEQQSR SPAVIAADQR AIAMATAGVS SAAERQRPSC  360
KEEVVQLSRL LGDSPSILAL QRFSSAMDRR VAPSMDAGQD VWVWEVLLPD DHTSSSTMCL  420
LDTTNLSDDR ETKEPMMITP PSSDTDVRDE PVDEFKDIGV VLDESTEPSE EAALPEATDL  480
AAASDGDEGE KPFQSADTKK PDEVADPSAA SDGKEEEKQF QSRDTKESVD DGEFEGEEDD  540
AIKNKKGNGQ ERPECAVFSV GKLKVNGIGA LCSFGVAAAT VCVFLIGGQL HHHHRHQQQQ  600
RQKIQLQFFG DDDKTKTVKP QYDCTTRRMH RNLLALAPRA CRGCRFSLSK PDSSRAALPL  660
PLHYHHCAAS ALHGRGLASP PHSDGSSVPF LRPWLCLRGE ARLASGARAP ARGCSFPVLR  720
RGALRLLCTT RWLGSCRAWP GAGGGSAGPG RGSVRGARLV GARRGPCTDP EHAALHAKCS  780
SKGAVGMMTM RDLACSGKSS VQIADAASSS SSSTGAGAGG VRGKGGGGAA SARSLVTCLY  840
RARLAGRACI VSVTWRRSRG GLVGQAVLGV ALEDAASGAR LCKADVKPWL FSQHKGSKRL  900
DVAGARGGTV EVFWDLSGAK FGPGPEPLEG FYVAVVCDQE MVLLLGDMRK EAYRKTGAGR  960
PVTDTFIVAR REHIAGKKVY SAKAQFGDGG KCHDIEIECD PTAGVKDMCL EIRIDTKLVM  1020
RVKRLAWKFR GNQTILVDGL PVEVFWDVHG WLFSSTTSNA VFMFQTCQVP EKSMPRLYSQ  1080
IFEEPQVQGP GFSLILHAWN VE
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0042735e-57AP004273.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0431A02.
GenBankAP0149635e-57AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
GenBankCP0126155e-57CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39003273
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-21related to AP2 11